Rename directory applicationCode -> src

src/phase_associator_wrapper.py

@@ -0,0 +1,59 @@
+#  -----------------
+#  Copyright © 2024 ACK Cyfronet AGH, Poland.
+#
+#  Licensed under the Apache License, Version 2.0 (the "License");
+#  you may not use this file except in compliance with the License.
+#  You may obtain a copy of the License at
+#
+#      http://www.apache.org/licenses/LICENSE-2.0
+#
+#  Unless required by applicable law or agreed to in writing, software
+#  distributed under the License is distributed on an "AS IS" BASIS,
+#  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+#  See the License for the specific language governing permissions and
+#  limitations under the License.
+#
+#  This work was partially funded by DT-GEO Project.
+#  -----------------
+
+import sys
+import argparse
+
+from PyOctoPhaseAssociation import main as phaseassoc
+
+
+def main(argv):
+    parser = argparse.ArgumentParser()
+    parser.add_argument("qml_picks", help="Path to input file of type 'quakeml_seismogram_picks'")
+    parser.add_argument("inventory", nargs='+', help="Paths to input files of type 'inventory'")
+
+    parser.add_argument("--velocity_model", help="Path to input file of type 'velocity_model'", type=str,
+                        required=False)
+    parser.add_argument("--lat_min", type=float)
+    parser.add_argument("--lat_max", type=float)
+    parser.add_argument("--lon_min", type=float)
+    parser.add_argument("--lon_max", type=float)
+    parser.add_argument("--z_min", type=float)
+    parser.add_argument("--z_max", type=float)
+    parser.add_argument("--grid_hor_extent", type=float, default=None, required=False)
+    parser.add_argument("--grid_spacing", type=float, default=None, required=False)
+    parser.add_argument("--p_vel_const", type=float, default=None, required=False)
+    parser.add_argument("--s_vel_const", type=float, default=None, required=False)
+    parser.add_argument("--n_picks", type=int, default=4, required=False)
+    parser.add_argument("--n_p_picks", type=int, default=0, required=False)
+    parser.add_argument("--n_s_picks", type=int, default=0, required=False)
+    parser.add_argument("--n_p_s_picks", type=int, default=0, required=False)
+    parser.add_argument("--time_before", type=float, default=10, required=False)
+    parser.add_argument("--tolerance", type=float, default=1, required=False)
+    parser.add_argument("--assoc_cut_dist", type=float, default=250, required=False)
+    parser.add_argument("--pick_match_tolerance", type=float, default=0.5, required=False)
+    parser.add_argument("--p_hint", type=str, default="P", required=False)
+    parser.add_argument("--s_hint", type=str, default="S", required=False)
+
+    args = parser.parse_args()
+    phaseassoc(**vars(args))
+    return
+
+
+if __name__ == '__main__':
+    main(sys.argv)