Merge pull request 'enable cython' (!19) from ftong-patch-cython into master
Reviewed-on: #19 Reviewed-by: asia <asia@noreply.example.org>
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commit
2fbca21917
@ -81,6 +81,7 @@ def main(catalog_file, mc_file, pdf_file, m_file, m_select, mag_label, mc, m_max
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m_range = [None]
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else:
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m_range = read_mat_m(m_file)
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m_max = m_range[-1] # take m_max from the m_file
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if verbose:
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logger.setLevel(logging.DEBUG)
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@ -320,8 +321,8 @@ verbose: {verbose}")
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lambdas = [None]
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if custom_rate != None and forecast_select:
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logger.info(f"Using activity rate specified by user: {custom_rate} per {time_unit}")
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lambdas = [custom_rate]
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lambdas_perc = [1]
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lambdas = np.array([custom_rate], dtype='d')
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lambdas_perc = np.array([1], dtype='d')
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elif rate_select:
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logger.info(f"Activity rate modeling selected")
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@ -377,8 +378,11 @@ verbose: {verbose}")
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# validate m_max against the grond motion model
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models_anthro_limited = ['Lasocki2013', 'Atkinson2015', 'ConvertitoEtAl2012Geysers'] # these models require that m_max<=4.5
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if m_max > 4.5 and model in models_anthro_limited:
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msg = f"Selected ground motion model {model} is only valid up to a maximum magnitude of 4.5. Please try again with a lower maximum magnitude."
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if m_max > 4.5 and model in models_anthro_limited:
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if m_file is None:
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msg = f"The selected ground motion model {model} is only valid for magnitudes up to 4.5. Please select a lower maximum magnitude."
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else:
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msg = f"The selected ground motion model {model} is only valid for magnitudes up to 4.5, but the provided magnitude file includes values up to {m_max}. Please adjust the magnitude range in the file accordingly."
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logger.error(msg)
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raise Exception(msg)
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@ -462,7 +466,7 @@ verbose: {verbose}")
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imls = [dask.delayed(compute_IMT_exceedance)(rx_lat[i], rx_lon[i], distances[i].flatten(), fr, p, lambdas,
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forecast_len, lambdas_perc, m_range, m_pdf, m_cdf, model,
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log_level=logging.DEBUG, imt=imt, IMT_min=0.0, IMT_max=2.0, rx_label=i,
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rtol=0.1, use_cython=False) for i in iter]
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rtol=0.1, use_cython=True) for i in iter]
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iml = dask.compute(*imls)
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iml_grid_raw.append(list(iml))
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@ -474,7 +478,7 @@ verbose: {verbose}")
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for i in iter:
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iml_i = compute_IMT_exceedance(rx_lat[i], rx_lon[i], distances[i].flatten(), fr, p, lambdas, forecast_len,
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lambdas_perc, m_range, m_pdf, m_cdf, model, imt=imt, IMT_min = 0.0,
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IMT_max = 2.0, rx_label = i, rtol = 0.1, use_cython=False)
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IMT_max = 2.0, rx_label = i, rtol = 0.1, use_cython=True)
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iml.append(iml_i)
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logger.info(f"Estimated {imt} at rx {i} is {iml_i}")
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iml_grid_raw.append(iml)
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